Description

Metagenome assembler for long-read sequences (HiFi and ONT).

Input

Name
Description
Pattern

0 ()

1 ()

input_type (string)

Sequencing technology for reads - either "hifi" for PacBio HiFi reads or "ont" for Oxford Nanopore reads.

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

metamdbg Documentation

MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.

doi: 10.1038/s41587-023-01983-6License: MIT
nf-core pipelines with this module
metagenomeassembly
Authors