Description
Aggregate results from bioinformatics analyses across many samples into a single report
Input
List of reports / files recognised by MultiQC, for example the html and zip output of FastQC
Second optional config yml for MultiQC. Will override common sections in multiqc_config.
*.{yml,yaml}
Optional two-column sample renaming file. First column a set of
patterns, second column a set of corresponding replacements. Passed via
MultiQC's --replace-names
*.{tsv}
Tools
multiqc Documentation
MultiQC searches a given directory for analysis logs and compiles a HTML report. It's a general use tool, perfect for summarising the output from numerous bioinformatics tools.