Description

Detecting and estimating inter-sample DNA contamination became a crucial quality assessment step to ensure high quality sequence reads and reliable downstream analysis.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

Output

Name
Description
Pattern

log ()

selfsm ()

depthsm ()

selfrg ()

depthrg ()

bestsm ()

bestrg ()

versions ()

Tools

verifybamid Documentation

verifyBamID is a software that verifies whether the reads in particular file match previously known genotypes for an individual (or group of individuals), and checks whether the reads are contaminated as a mixture of two samples.

https://github.com/statgen/verifyBamIDdoi: 10.1016/j.ajhg.2012.09.004License: GPL v3
Authors