Description

A submodule that clusters the merged AMP hits generated from ampcombi2/parsetables and ampcombi2/complete using MMseqs2 cluster.

Input

Name
Description
Pattern

summary_file (file)

A file corresponding to the Ampcombi_summary.tsv that is generated by running 'ampcombi complete'. It is a file containing all the merged AMP results from all samples and all tools.

*.tsv

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

ampcombi2/cluster Documentation

A tool for clustering all AMP hits found across many samples and supporting many AMP prediction tools.

https://github.com/paleobiotechnology/AMPcombi/tree/devLicense: MIT
Authors