Description

Calculates base frequency statistics across reference positions from BAM.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

Output

Name
Description
Pattern

depth_sample ()

depth_global ()

qs ()

pos ()

counts ()

icounts ()

versions ()

Tools

angsd Documentation

ANGSD: Analysis of next generation Sequencing Data

https://github.com/ANGSD/angsddoi: 10.1186/s12859-014-0356-4License: GPL v3, MIT
Authors