modules/
antismash_antismashlitedownloaddatabases

antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters. This module downloads the antiSMASH databases for conda and docker/singularity runs.

secondary metabolites BGC biosynthetic gene cluster genome mining NRPS RiPP antibiotics prokaryotes bacteria eukaryotes fungi antismash database

https://github.com/nf-core/modules/tree/master/modules/nf-core/antismash/antismashlitedownloaddatabases

Description

antiSMASH allows the rapid genome-wide identification, annotation and analysis of secondary metabolite biosynthesis gene clusters. This module downloads the antiSMASH databases for conda and docker/singularity runs.

Input

Name

Description

Pattern

`0` ()

`0` ()

`0` ()

Output

Name

Description

Pattern

`database` ()

`antismash_dir` ()

`versions` ()

Tools

antismash Documentation

antiSMASH - the antibiotics and Secondary Metabolite Analysis SHell

https://github.com/antismash/antismashdoi: 10.1093/nar/gkab335License: AGPL v3

Authors

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