Description

Normalize antibiotic resistance genes (ARGs) using the ARO ontology (developed by CARD).

Input

Name
Description
Pattern

0 ()

1 ()

tool (string)

ARG annotation tool used

argsoap|abricate|deeparg|resfinder|amrfinderplus

db (string)

Database used for ARG annotation

sarg|ncbi|resfinder|deeparg|megares|argannot|resfinderfg

Output

Name
Description
Pattern

0 ()

0 ()

Tools

argnorm Documentation

Normalize antibiotic resistance genes (ARGs) using the ARO ontology (developed by CARD).

https://github.com/BigDataBiology/argNormLicense: MIT
Authors