Description

Split sequencing reads by mapping them to multiple references simultaneously

Input

Name
Description
Pattern

0 ()

1 ()

index (directory)

Directory to place generated index

*

primary_ref (file)

Path to the primary reference

*

0 ()

1 ()

only_build_index (string)

true = only build index; false = mapping

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

bbmap Documentation

BBMap is a short read aligner, as well as various other bioinformatic tools.

License: UC-LBL license (see package)
Authors