Description

Converts VCF/BCF files into a tab-delimited table using the bcftools +vcf2table plugin. Each variant is output as one row, with INFO and FORMAT fields as columns.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

1 ()

2 ()

3 ()

Output

Name
Description
Pattern

0 ()

0 ()

Tools

bcftools Documentation

BCFtools is a set of utilities for variant calling and manipulating VCF/BCF files. The +vcf2table plugin converts VCF records into a tab-delimited table format.

doi: 10.1093/gigascience/giab008License: MIT
Authors