Description

Sorts a feature file by chromosome and other criteria.

Input

Name
Description
Pattern

0 ()

1 ()

genome_file (file)

Optional reference genome 2 column file that defines the expected chromosome order.

*.{fai,txt,chromsizes}

Output

Name
Description
Pattern

0 ()

0 ()

Tools

bedtools Documentation

A set of tools for genomic analysis tasks, specifically enabling genome arithmetic (merge, count, complement) on various file types.

License: MIT
nf-core pipelines with this module
genealignmenttreeval
Authors