Description

Performs fastq alignment to a fasta reference using BWA-FastAlign.

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

sort_bam (boolean)

use samtools sort (true) or samtools view (false)

true or false

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

bwafastalign Documentation

Faster and Cheaper Sequence Alignment on Commercial CPUs (A faster version of bwa-mem with identical outputs).

doi: 10.1145/3774934.3786421License: MIT
Authors