Description

Module to use CellBender to estimate ambient RNA from single-cell RNA-seq data

Input

Name
Description
Pattern

0 ()

1 ()

Output

Name
Description
Pattern

h5 ()

filtered_h5 ()

posterior_h5 ()

barcodes ()

metrics ()

report ()

pdf ()

log ()

checkpoint ()

versions ()

Tools

cellbender Documentation

CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

https://github.com/broadinstitute/CellBenderLicense: BSD-3-Clause
Authors