Description

cellpose segments cells in images using GPU-accelerated deep learning

Input

Name
Description
Pattern

0 ()

1 ()

model (file)

Optional custom cellpose model file. When provided, passed as --pretrained_model to cellpose. Pass [] (empty list) to use the default model (cpsam in cellpose 4).

*

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

cellpose Documentation

cellpose is an anatomical segmentation algorithm written in Python 3 by Carsen Stringer and Marius Pachitariu

https://github.com/MouseLand/cellposedoi: 10.1038/s41592-022-01663-4License: BSD 3-Clause
Authors