Description

CheckM provides a set of tools for assessing the quality of genomes recovered from isolates, single cells, or metagenomes.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

exclude_marker_file (file)

File specifying markers to exclude from marker sets

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

checkm Documentation

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes.

https://github.com/Ecogenomics/CheckMdoi: 10.1101/gr.186072.114License: GPL v3
Authors