Description

A python client and analysis toolkit to annotate variants with information from the Clinical Interpretations of Variants in Cancer (CIViC) knowledgebase

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

annotation_genome_version (string)

Reference genome version passed to civicpy (e.g. GRCh38)

cache (file)

Optional civicpy cache file (*.pkl). If not provided, civicpy will download and cache data locally.

*.pkl

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

civicpy Documentation

CIViC variant knowledgebase analysis toolkit.

https://github.com/griffithlab/civicpydoi: 10.1200/CCI.19.00127License: MIT
Authors