Description

Efficient phylogenetic tree reconstruction for sequences using the CMAPLE algorithm

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Tools

cmaple Documentation

CMAPLE (Comprehensive Maximum-likelihood Analysis for Phylogenetic Likelihood Estimation) is an efficient implementation of the MAPLE algorithm for phylogenetic tree reconstruction, particularly optimized for pathogen sequences with low divergence such as SARS-CoV-2. It is integrated within IQ-TREE.

https://github.com/iqtree/cmapledoi: 10.1093/molbev/msae134License: GPL-2.0
Authors