Description

A software pipeline for the analysis of genome editing outcomes from deep sequencing data

Input

Name
Description
Pattern

0 ()

1 ()

amplicon_sequences (string)

A comma-separated list of amplicon sequences.

^([ACGTUMRWSYKVHDBN]+,)*[ACGTUMRWSYKVHDBN]+$

amplicon_file (file)

A text file containing amplicon sequences, one per line.

*.txt

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

crispresso2 Documentation

CRISPResso2 is a software pipeline designed to enable rapid and intuitive interpretation of genome editing experiments.

https://github.com/pinellolab/CRISPResso2doi: 10.1038/s41587-019-0032-3License: MIT
Authors