Description

Controllable lossy compression of BAM/CRAM files

Input

Name
Description
Pattern

0 ()

1 ()

keepbed (file)

BED file defining regions to keep quality

bedout (boolean)

set to true to output suspicious regions to a BED file

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

crumble Documentation

Controllable lossy compression of BAM/CRAM files

doi: 10.1093/bioinformatics/bty608License: multiple BSD style licenses
nf-core pipelines with this module
readmapping
Authors