Description

Visualises sample correlations using a compressed matrix generated by mutlibamsummary or multibigwigsummary as input.

Input

Name
Description
Pattern

0 ()

1 ()

method (string)

Correlation coefficient to use for heatmap or scatterplot generation

{spearman,pearson}

plot_type (string)

Type of output plot to display sample correlation

{heatmap,scatterplot}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

deeptools Documentation

A set of user-friendly tools for normalization and visualization of deep-sequencing data

https://github.com/deeptools/deepToolsdoi: 10.1093/nar/gku365License: GPL v3
Authors