Description

Convert any PEP project or Nextflow samplesheet to any format

Input

Name
Description
Pattern

samplesheet (file)

Nextflow samplesheet or PEP project

*.{yaml,yml,csv}

format (string)

Extension of an output file

pep_input_base_dir (file)

Optional path to the directory where files specified in a PEP config file are stored. Any paths specified in the config will need to be relative to this base directory.

Output

Name
Description
Pattern

0 ()

0 ()

Tools

eido Documentation

Convert any PEP project or Nextflow samplesheet to any format

doi: 10.1093/gigascience/giab077License: BSD-2-Clause
Authors