Description

Computes coverage depth statistics for assembled contigs from one or more fairy sketch files, producing a MetaBAT2-compatible TSV with per-contig mean depth and variance columns.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

Output

Name
Description
Pattern

0 ()

0 ()

Tools

fairy Documentation

fairy is a fast, alignment-free, k-mer-based tool for computing coverage depth statistics for metagenomic samples. It is orders of magnitude faster than alignment-based approaches and produces output directly compatible with MetaBAT2.

License: MIT
Authors