Description

tool that takes either fragmented metagenomic data or longer sequences as input and predicts and delivers full-length antiobiotic resistance genes as output.

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

Output

Name
Description
Pattern

log ()

txt ()

hmm ()

hmm_genes ()

orfs ()

orfs_amino ()

contigs ()

contigs_pept ()

filtered ()

filtered_pept ()

fragments ()

trimmed ()

spades ()

metagenome ()

tmp ()

versions ()

Tools

fargene Documentation

Fragmented Antibiotic Resistance Gene Identifier takes either fragmented metagenomic data or longer sequences as input and predicts and delivers full-length antiobiotic resistance genes as output

License: MIT
Authors