Description

Alignment-free computation of Average Nucleotide Identity (ANI)

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

ql (file)

File containing a list of query fasta paths. query input takes precedence over this list if both are provided.

*.txt

rl (file)

File containing a list of reference fasta paths. reference input takes precedence over this list if both are provided.

*.txt

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

fastani Documentation

FastANI is developed for fast alignment-free computation of whole-genome Average Nucleotide Identity (ANI).

doi: 10.1038/s41467-018-07641-9License: Apache-2.0
Authors