Description

Quickly compute statistics over a fasta file in windows.

Input

Name
Description
Pattern

0 ()

1 ()

Output

Name
Description
Pattern

freq ()

mononuc ()

dinuc ()

trinuc ()

tetranuc ()

versions ()

Tools

fastawindows Documentation

fasta_windows is a tool written for Darwin Tree of Life chromosomal level genome assemblies. The executable takes a fasta formatted file and calculates some statistics of interest in windows

License: MIT
nf-core pipelines with this module
blobtoolkitsequencecomposition
Authors