Description

Build fastq screen config file from bowtie index files

Input

Name
Description
Pattern

genome_names (string)

List of names for each index

indexes (directory)

Bowtie2 genome directories containing index files

Output

Name
Description
Pattern

0 ()

0 ()

Tools

fastqscreen Documentation

FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect.

https://github.com/StevenWingett/FastQ-Screen/archive/refs/tags/v0.15.3.zipdoi: 10.5281/zenodo.5838377License: GPL-3.0-or-later
Authors