Description

Align reads to multiple reference genomes using fastq-screen

Input

Name
Description
Pattern

0 ()

1 ()

database (directory)

fastq screen database folder containing config file and index folders

FastQ_Screen_Genomes

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

fastqscreen Documentation

FastQ Screen allows you to screen a library of sequences in FastQ format against a set of sequence databases so you can see if the composition of the library matches with what you expect.

https://github.com/StevenWingett/FastQ-Screen/archive/refs/tags/v0.15.3.zipdoi: 10.5281/zenodo.5838377License: GPL-3.0-or-later
Authors