Description

Collects a suite of metrics to QC duplex sequencing data.

Input

Name
Description
Pattern

0 ()

1 ()

interval_list (file)

Calculation of metrics may be restricted to a set of regions using the --intervals parameter. The file format is descripted here https://samtools.github.io/htsjdk/javadoc/htsjdk/index.html?htsjdk/samtools/util/Interval.html

*.{tsv|txt|interval_list}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

fgbio Documentation

A set of tools for working with genomic and high throughput sequencing data, including UMIs

https://github.com/fulcrumgenomics/fgbioLicense: MIT

r-ggplot2 Documentation

ggplot2 is a system for declaratively creating graphics, based on The Grammar of Graphics.

https://github.com/tidyverse/ggplot2License: MIT
Authors