Description

call variant and sequencing depth information of the variant

Input

Name
Description
Pattern

0 ()

1 ()

fasta (file)

The reference sequence used for mapping and generating the BAM file

*.fa

Output

Name
Description
Pattern

0 ()

0 ()

Tools

freyja Documentation

Freyja recovers relative lineage abundances from mixed SARS-CoV-2 samples and provides functionality to analyze lineage dynamics.

https://github.com/andersen-lab/Freyjadoi: 10.1038/s41586-022-05049-6License: BSD-2-Clause
Authors