Description

GangSTR is a tool for genome-wide profiling tandem repeats from short reads.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

fasta (file)

The reference FASTA file

*.{fasta,fa}

fasta_fai (file)

The index of the reference FASTA file

*.fai

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

gangstr Documentation

GangSTR is a tool for genome-wide profiling tandem repeats from short reads.

doi: 10.1093/nar/gkz501License: GPL v3-or-later
Authors