Description

Complete gapseq workflow from genome to gap-filled model

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Tools

gapseq Documentation

gapseq is designed to combine metabolic pathway analysis with metabolic network reconstruction and curation. The doall command runs the complete workflow: pathway prediction, transporter inference, model construction, and gap filling.

https://github.com/jotech/gapseqdoi: 10.1186/s13059-021-02295-1License: AGPL-3.0-only
Authors