Description

estimates the parameters for the DRAGstr model

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

fasta (file)

The reference FASTA file

*.{fasta,fa}

fasta_fai (file)

The index of the reference FASTA file

*.fai

dict (file)

The sequence dictionary of the reference FASTA file

*.dict

strtablefile (file)

The StrTableFile zip folder of the reference FASTA file

*.zip

Output

Name
Description
Pattern

0 ()

0 ()

Tools

gatk4 Documentation

Genome Analysis Toolkit (GATK4). Developed in the Data Sciences Platform at the Broad Institute, the toolkit offers a wide variety of tools with a primary focus on variant discovery and genotyping. Its powerful processing engine and high-performance computing features make it capable of taking on projects of any size.

https://github.com/broadinstitute/gatkdoi: 10.1158/1538-7445.AM2017-3590License: Apache-2.0
Authors