Description

GECCO is a fast and scalable method for identifying putative novel Biosynthetic Gene Clusters (BGCs) in genomic and metagenomic data using Conditional Random Fields (CRFs).

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

model_dir (directory)

Path to an alternative CRF (Conditional Random Fields) module to use

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

gecco Documentation

Biosynthetic Gene Cluster prediction with Conditional Random Fields.

https://github.com/zellerlab/GECCOdoi: 10.1101/2021.05.03.442509License: GPL v3
Authors