Description

Peak-calling for ChIP-seq and ATAC-seq enrichment experiments

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

Output

Name
Description
Pattern

peak ()

versions ()

bedgraph_pvalues ()

bedgraph_pileup ()

bed_intervals ()

duplicates ()

Tools

genrich Documentation

Genrich is a peak-caller for genomic enrichment assays (e.g. ChIP-seq, ATAC-seq). It analyzes alignment files generated following the assay and produces a file detailing peaks of significant enrichment.

https://github.com/jsh58/GenrichLicense: MIT
Authors