Description

Compute the r2 correlation between imputed dosages (in MAF bins) and highly-confident genotype calls from the high-coverage dataset.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

4 ()

5 ()

6 ()

7 ()

0 ()

0 ()

0 ()

Output

Name
Description
Pattern

errors_cal ()

errors_grp ()

errors_spl ()

rsquare_grp ()

rsquare_spl ()

versions ()

Tools

glimpse Documentation

GLIMPSE is a phasing and imputation method for large-scale low-coverage sequencing studies.

https://github.com/odelaneau/GLIMPSEdoi: 10.1038/s41588-020-00756-0License: MIT
Authors