Description

Quickly estimate coverage from a whole-genome bam or cram index. A bam index has 16KB resolution so that's what this gives, but it provides what appears to be a high-quality coverage estimate in seconds per genome.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

1 ()

Output

Name
Description
Pattern

output ()

ped ()

bed ()

bed_index ()

roc ()

html ()

png ()

versions ()

Tools

goleft Documentation

goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

doi: 10.1093/gigascience/gix090License: MIT
Authors