Description

Extract read fragments from a BAM file whose reads overlap a set of target regions, producing a subset BAM for targeted GRIDSS structural variant calling.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

1 ()

Output

Name
Description
Pattern

0 ()

0 ()

Tools

gridss Documentation

GRIDSS: the Genomic Rearrangement IDentification Software Suite

https://github.com/PapenfussLab/gridssdoi: 10.1186/s13059-021-02423-xLicense: GPL v3
Authors