modules/
gt_ltrharvest

Predicts LTR retrotransposons using GenomeTools gt-ltrharvest utility

genomics genome annotation repeat transposons retrotransposons

https://github.com/nf-core/modules/tree/master/modules/nf-core/gt/ltrharvest

Description

Predicts LTR retrotransposons using GenomeTools gt-ltrharvest utility

Input

Name

Description

Pattern

`0` ()

`1` ()

Output

Name

Description

Pattern

`0` ()

`0` ()

`0` ()

`0` ()

`0` ()

Tools

gt Documentation

The GenomeTools genome analysis system

https://github.com/genometools/genometoolsdoi: 10.1109/TCBB.2013.68License: ISC

Authors

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