Description

Converts the output classifications of GTDB-TK from GTDB taxonomy to NCBI taxonomy

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

1 ()

0 ()

1 ()

Output

Name
Description
Pattern

0 ()

0 ()

Tools

gtdbtk Documentation

GTDB-Tk is a software toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes based on the Genome Database Taxonomy GTDB.

nf-core pipelines with this module
metagenomeassembly
Authors