Description

Tool to convert and summarize fARGene outputs using the hAMRonization specification

Input

Name
Description
Pattern

0 ()

1 ()

format (string)

Type of report file to be produced

tsv|json

software_version (string)

Version of fARGene used

[0-9].[0-9].[0-9]

reference_db_version (string)

Database version of fARGene used

[0-9].[0-9].[0-9]

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

hamronization Documentation

Tool to convert and summarize AMR gene detection outputs using the hAMRonization specification

https://github.com/pha4ge/hAMRonizationLicense: GNU Lesser General Public v3 (LGPL v3)
Authors