Description

Whole-genome assembly using PacBio HiFi reads

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

2 ()

0 ()

1 ()

2 ()

Output

Name
Description
Pattern

raw_unitigs ()

corrected_reads ()

source_overlaps ()

reverse_overlaps ()

processed_contigs ()

processed_unitigs ()

primary_contigs ()

alternate_contigs ()

paternal_contigs ()

maternal_contigs ()

log ()

versions ()

Tools

hifiasm Documentation

Haplotype-resolved assembler for accurate HiFi reads

doi: 10.1038/s41592-020-01056-5License: MIT
nf-core pipelines with this module
genomeassembly
Authors