Description

extract hmm from hmm database file or create index for hmm database

Input

Name
Description
Pattern

0 ()

1 ()

key (string)

Name of HMM to extract. Specify either this or keyfile. If none is specified, an index will be built.

keyfile (file)

File containing list of HMM models to extract. Specify either this or key. If none is specified, an index will be built.

*.txt

index (file)

Index file from another run.

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

hmmer Documentation

Biosequence analysis using profile hidden Markov models

https://github.com/EddyRivasLab/hmmerdoi: 10.1371/journal.pcbi.1002195License: BSD
Authors