modules/
hmmer_hmmlogo

extract logo data from a profile HMM file to produce an HMM logo

hidden markov model HMM hmmer logo profile sequence logo

https://github.com/nf-core/modules/tree/master/modules/nf-core/hmmer/hmmlogo

Description

extract logo data from a profile HMM file to produce an HMM logo

Input

Name

Description

Pattern

`0` ()

`1` ()

Output

Name

Description

Pattern

`0` ()

`0` ()

Tools

hmmer Documentation

Biosequence analysis using profile hidden Markov models

https://github.com/EddyRivasLab/hmmerdoi: 10.1371/journal.pcbi.1002195License: BSD

Authors

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