Description

Assembly polisher using short (and long) reads

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

draft (file)

Input (fasta) file containing draft contig assembly

genome_size (string)

Estimated size of the genome. Number or nts or use suffixes k/m/g, e.g. 5m, 3.2g

reads_coverage (integer)

Appprimate depth of coverage of short reads.

Output

Name
Description
Pattern

0 ()

0 ()

Tools

hypo Documentation

Super Fast and Accurate Polisher for Long Read Genome Assemblies.

https://github.com/kensung-lab/hypodoi: 10.1101/2019.12.19.882506License: GPL v3
Authors