Description

Filtering VCF with dynamically-compiled java expressions

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

Output

Name
Description
Pattern

vcf ()

tbi ()

csi ()

versions ()

Tools

jvarkit Documentation

Java utilities for Bioinformatics.

https://github.com/lindenb/jvarkitdoi: 10.1093/bioinformatics/btx734 License: MIT License

bcftools Documentation

View, subset and filter VCF or BCF files by position and filtering expression. Convert between VCF and BCF

doi: 10.1093/bioinformatics/btp352License: MIT
Authors