Description

index creation for kb count quantification of single-cell data.

Input

Name
Description
Pattern

fasta (file)

Genomic DNA fasta file

*.{fasta,fasta.gz}

gtf (file)

Genomic gtf file

*.{gtf,gtf.gz}

workflow_mode (string)

String value defining workflow to use, can be one of "standard", "nac", "lamanno" (obsolete)

{standard,lamanno,nac}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

kb Documentation

kallisto|bustools (kb) is a tool developed for fast and efficient processing of single-cell OMICS data.

https://github.com/pachterlab/kb_pythondoi: 10.22002/D1.1876License: MIT
Authors