Description

Creates a histogram of the number of distinct k-mers having a given frequency.

Input

Name
Description
Pattern

0 ()

1 ()

Output

Name
Description
Pattern

hist ()

json ()

png ()

ps ()

pdf ()

jellyfish_hash ()

versions ()

Tools

kat Documentation

KAT is a suite of tools that analyse jellyfish hashes or sequence files (fasta or fastq) using kmer counts

https://github.com/TGAC/KATdoi: 10.1093/bioinformatics/btw663License: GPL v3
Authors