Description

Mapping raw reads directly against redundant databases via KMA alignment

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

interleaved (boolean)

use one interleaved fastq file (true) or two paired fastq files (false)

true or false

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

kma Documentation

Rapid and precise alignment of raw reads against redundant databases with KMA

doi: 10.1186/s12859-018-2336-6License: Apache-2.0
Authors