Description

Produces annotation using kofamscan against a Profile database and a KO list

Input

Name
Description
Pattern

0 ()

1 ()

profiles (directory)

Directory containing the Profiles database

*

ko_list (file)

File containing list of KO entries with their data

*.{fa,fasta}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

kofamscan Documentation

KofamKOALA assigns K numbers to the user's sequence data by HMMER/HMMSEARCH against KOfam

doi: 10.1093/bioinformatics/btz859License: MIT License
Authors