A command-line tool for downloading databases for local protein domain annotation using NCBI's Conserved Domain Database (CDD)
cdd rpsblast rpsbproc protein domain annotation download
https://github.com/nf-core/modules/tree/master/modules/nf-core/localcdsearch/download
databases
List of database names to download. Can be a single database name or multiple names. Valid options: cdd, cdd_ncbi, cog, kog, pfam, prk, smart, tigr
cdd|cdd_ncbi|cog|kog|pfam|prk|smart|tigr
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Protein annotation using local PSSM databases from CDD.
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