Description

Lofreq subcommand to for insert base and indel alignment qualities

Input

Name
Description
Pattern

0 ()

1 ()

fasta (file)

Reference genome FASTA file

*.{fasta}

Output

Name
Description
Pattern

0 ()

0 ()

Tools

lofreq Documentation

A fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data